Transcript: C45E1.1c.1

Description

Nuclear hormone receptor family member nhr-64 [Source:NCBI gene;Acc:171884]

Location

Chromosome I: 3,101,983-3,109,522 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 27 domains and features and maps to 58 oligo probes.

Gene

This transcript is a product of gene WBGene00003654 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C45E1.1a.2	-	1359	369aa	C45E1.1a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44960	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C45E1.1c.1	-	1128	375aa	C45E1.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9C2W7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
C45E1.1a.1	-	1123	369aa	C45E1.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44960	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C45E1.1b.1	-	1035	344aa	C45E1.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44960	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,128 bps, Translation length: 375 residues

Version

C45E1.1c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: C45E1.1c.1

Summary

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Transcript: C45E1.1c.1

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