Transcript: ZC410.1d.1

Description

NR LBD domain-containing protein; Nuclear hormone receptor family member nhr-11 [Source:NCBI gene;Acc:177724]

Location

About this transcript

This transcript has 11 exons, is annotated with 23 domains and features and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ZC410.1a.1	-	1482	459aa	ZC410.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q23294	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ZC410.1d.1	-	1475	456aa	ZC410.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G2T1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ZC410.1b.1	-	1029	342aa	ZC410.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q23294	-
ZC410.1e.1	-	834	277aa	ZC410.1e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G2T0	-
ZC410.1c	-	1337	No protein	-	A non-coding gene.ncRNA	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,475 bps, Translation length: 456 residues

Version

ZC410.1d.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase