Transcript: K10B2.1b.1

Description

F-box/WD repeat-containing protein lin-23 [Source:NCBI gene;Acc:174058]

Location

About this transcript

This transcript has 8 exons, is annotated with 45 domains and features and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
K10B2.1a.1	-	2870	665aa	K10B2.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q09990	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
K10B2.1b.1	-	2652	667aa	K10B2.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AUM4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
K10B2.1c.1	-	1839	612aa	K10B2.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AWY7	-
K10B2.1d.1	-	1833	610aa	K10B2.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3ARM6	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,652 bps, Translation length: 667 residues

Version

K10B2.1b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase