Transcript: ENSBTAT00000125689.1 PTCH2-204

Description

patched 2 [Source:VGNC Symbol;Acc:VGNC:33492]

Location

Primary_assembly 3: 101,179,117-101,197,070 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 26 domains and features and is associated with 2522 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000024137.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000131116.1	PTCH2-203	4487	1212aa	ENSBTAP00000103407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000114249.1	PTCH2-201	4316	1130aa	ENSBTAP00000099637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000033308.6	PTCH2-202	4247	1150aa	ENSBTAP00000033224.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B778	-
ENSBTAT00000125689.1	PTCH2-204	3696	1146aa	ENSBTAP00000077740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,696 bps, Translation length: 1,146 residues

Version

ENSBTAT00000125689.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000125689.1 PTCH2-204

Summary

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Transcript: ENSBTAT00000125689.1 PTCH2-204

Summary

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