Transcript: ENSBTAT00000114840.1 VSX1-203

Description

visual system homeobox 1 [Source:VGNC Symbol;Acc:VGNC:36845]

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features and is associated with 770 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000004329.6	VSX1-201	1939	365aa	ENSBTAP00000004329.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000112590.1	VSX1-202	1949	218aa	ENSBTAP00000082362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000114840.1	VSX1-203	1002	237aa	ENSBTAP00000075341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,002 bps, Translation length: 237 residues

Version

ENSBTAT00000114840.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 3, 4.