Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SGSM1 ENSBTAG00000006592

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Description

small G protein signaling modulator 1 [Source:VGNC Symbol;Acc:VGNC:34550]

Location

Primary_assembly 17: 65,010,726-65,083,923 forward strand.

ARS-UCD1.3:CM008184.2

About this gene

This gene has 5 transcripts (splice variants), 273 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073161.2	SGSM1-205	4771	1164aa	ENSBTAP00000060819.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000066416.2	SGSM1-201	4741	1149aa	ENSBTAP00000059216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MVQ9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000008658.6	SGSM1-204	4598	1139aa	ENSBTAP00000008658.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MEY0	-
ENSBTAT00000083118.2	SGSM1-202	4576	1094aa	ENSBTAP00000067855.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N9L9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000068842.2	SGSM1-203	4558	1088aa	ENSBTAP00000070876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NGE4	-

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Summary

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