Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNPO2 ENSBTAG00000006434

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Description

synaptopodin 2 [Source:VGNC Symbol;Acc:VGNC:35531]

Location

Primary_assembly 6: 6,232,763-6,434,637 reverse strand.

ARS-UCD1.3:CM008173.2

About this gene

This gene has 3 transcripts (splice variants), 270 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008434.7	SYNPO2-203	4329	1276aa	ENSBTAP00000008434.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IFK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000102990.1	SYNPO2-201	4945	1260aa	ENSBTAP00000084394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132846.1	SYNPO2-202	1555	130aa	ENSBTAP00000088544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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