Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCLAF ENSBTAG00000039462

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Description

PCNA clamp associated factor [Source:NCBI gene (formerly Entrezgene);Acc:540737]

Gene Synonyms

PAF, PAF15

Location

Primary_assembly 10: 45,645,738-45,653,956 forward strand.

ARS-UCD1.3:CM008177.2

About this gene

This gene has 5 transcripts (splice variants) and 195 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000101209.1	PCLAF-201	1403	120aa	ENSBTAP00000098013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000054209.4	PCLAF-204	1361	117aa	ENSBTAP00000051194.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5E9B2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000123628.1	PCLAF-205	1231	84aa	ENSBTAP00000084579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000124606.1	PCLAF-202	384	114aa	ENSBTAP00000083502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000106164.1	PCLAF-203	237	66aa	ENSBTAP00000101379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data