Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FAM78A ENSBTAG00000004542

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Description

family with sequence similarity 78 member A [Source:VGNC Symbol;Acc:VGNC:28829]

Location

Primary_assembly 11: 101,450,758-101,465,047 reverse strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 2 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000005969.7	FAM78A-202	1444	341aa	ENSBTAP00000005969.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6P9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000042953.5	FAM78A-201	3768	283aa	ENSBTAP00000040555.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PJ92	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data