Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SWT1 ENSBTAG00000004492

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Description

SWT1 RNA endoribonuclease homolog [Source:VGNC Symbol;Acc:VGNC:35501]

Location

Primary_assembly 16: 66,166,549-66,274,219 forward strand.

ARS-UCD1.3:CM008183.2

About this gene

This gene has 6 transcripts (splice variants) and 185 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000113432.1	SWT1-205	3909	902aa	ENSBTAP00000101343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000061295.4	SWT1-202	2152	622aa	ENSBTAP00000053406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MNS1	-
ENSBTAT00000066845.2	SWT1-203	1947	518aa	ENSBTAP00000071361.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBC5	-
ENSBTAT00000112645.1	SWT1-201	1904	483aa	ENSBTAP00000091869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000098803.1	SWT1-204	1759	470aa	ENSBTAP00000094413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000005891.6	SWT1-206	1684	522aa	ENSBTAP00000005891.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQB4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data