Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGN5 ENSBTAG00000001877

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Description

high mobility group nucleosome binding domain 5 [Source:VGNC Symbol;Acc:VGNC:56709]

Location

Primary_assembly X: 71,422,763-71,433,090 forward strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 4 transcripts (splice variants) and 58 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082587.2	HMGN5-202	1993	299aa	ENSBTAP00000061898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000066774.2	HMGN5-201	1977	279aa	ENSBTAP00000068697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHV7	-
ENSBTAT00000121822.1	HMGN5-203	1963	289aa	ENSBTAP00000094359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000053474.3	HMGN5-204	474	158aa	ENSBTAP00000051689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BA81	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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