Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SAMM50 ENSBTAG00000045957

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Description

SAMM50 sorting and assembly machinery component [Source:VGNC Symbol;Acc:VGNC:34278]

Location

Primary_assembly 5: 114,694,786-114,725,673 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 3 transcripts (splice variants) and 269 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083459.2	SAMM50-201	2062	565aa	ENSBTAP00000073084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MMP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000063243.2	SAMM50-202	1701	469aa	ENSBTAP00000055147.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2HJ55	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000128244.1	SAMM50-203	1362	453aa	ENSBTAP00000092145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data