Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPIDR ENSBTAG00000044106

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Description

scaffold protein involved in DNA repair [Source:VGNC Symbol;Acc:VGNC:35216]

Location

Primary_assembly 14: 19,129,496-19,406,496 reverse strand.

ARS-UCD1.3:CM008181.2

About this gene

This gene has 4 transcripts (splice variants) and 175 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000102483.1	SPIDR-203	3169	942aa	ENSBTAP00000083393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000061199.4	SPIDR-201	3932	940aa	ENSBTAP00000053393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MPV0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000069390.2	SPIDR-202	3009	893aa	ENSBTAP00000064009.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1Z9	-
ENSBTAT00000071278.2	SPIDR-204	1250	202aa	ENSBTAP00000073743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MTQ7	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data