Transcript: ENSSSCT00000054143.3 PPP1R13L-202

Description

protein phosphatase 1 regulatory subunit 13 like [Source:VGNC Symbol;Acc:VGNC:91722]

Location

About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 176 variant alleles and maps to 29 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050546.3	PPP1R13L-201	3211	805aa	ENSSSCP00000050055.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B1L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000054143.3	PPP1R13L-202	3100	768aa	ENSSSCP00000059492.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BTD2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 3,100 bps, Translation length: 768 residues

Version

ENSSSCT00000054143.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.