Transcript: ENSSSCT00000042458.2 GUCY2C-201

Description

guanylate cyclase 2C [Source:VGNC Symbol;Acc:VGNC:111750]

Location

About this transcript

This transcript has 28 exons, is annotated with 26 domains and features, is associated with 3538 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042458.2	GUCY2C-201	3876	1075aa	ENSSSCP00000051408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5N6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000042247.2	GUCY2C-202	3870	1073aa	ENSSSCP00000037539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480MPB1 P55204	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 3,876 bps, Translation length: 1,075 residues

Version

ENSSSCT00000042458.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.