Transcript: ENSSSCT00000061640.3 COL2A1-201

Description

collagen type II alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:86874]

Location

About this transcript

This transcript has 55 exons, is annotated with 60 domains and features, is associated with 1425 variant alleles and maps to 19 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061640.3	COL2A1-201	5046	1486aa	ENSSSCP00000038204.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A2Q7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000047570.3	COL2A1-202	4883	1417aa	ENSSSCP00000036099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWS8	-

Summary

Statistics

Exons: 55, Coding exons: 55, Transcript length: 5,046 bps, Translation length: 1,486 residues

Version

ENSSSCT00000061640.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 32.