Transcript: ENSSSCT00000073708.2 COL9A1-202

Description

collagen type IX alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:109528]

Location

About this transcript

This transcript has 38 exons, is annotated with 32 domains and features, is associated with 2548 variant alleles and maps to 20 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000073708.2	COL9A1-202	3238	922aa	ENSSSCP00000062071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QD63 A0A8D0XSJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000004723.5	COL9A1-201	2885	691aa	ENSSSCP00000004615.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8X9AEQ8	-

Summary

Statistics

Exons: 38, Coding exons: 38, Transcript length: 3,238 bps, Translation length: 922 residues

Version

ENSSSCT00000073708.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.