Transcript: ENSSSCT00000102525.1 LRRK2-202

Description

leucine rich repeat kinase 2 [Source:NCBI gene (formerly Entrezgene);Acc:780403]

Location

About this transcript

This transcript has 50 exons, is annotated with 61 domains and features, is associated with 4782 variant alleles and maps to 10 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000000849.4	LRRK2-201	8436	2501aa	ENSSSCP00000000832.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SHN7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000102525.1	LRRK2-202	9158	2440aa	ENSSSCP00000079770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FN81	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 50, Coding exons: 50, Transcript length: 9,158 bps, Translation length: 2,440 residues

Version

ENSSSCT00000102525.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 14.