Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OPHN1 ENSSSCG00000022676

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Description

oligophrenin 1 [Source:VGNC Symbol;Acc:VGNC:91048]

Location

Primary_assembly X: 54,055,092-54,616,959 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 6 transcripts (splice variants), 200 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000066482.1	OPHN1-203	7015	808aa	ENSSSCP00000069677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QXS5 A0A8D0R7B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000073090.2	OPHN1-204	8479	803aa	ENSSSCP00000066461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VQV2 A0A5G2R782	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087587.2	OPHN1-205	8377	769aa	ENSSSCP00000063779.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VW04 A0A5G2QHF4	-
ENSSSCT00000094321.1	OPHN1-206	8272	734aa	ENSSSCP00000076826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FEU2	-
ENSSSCT00000074672.2	OPHN1-201	6455	786aa	ENSSSCP00000072940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VXI9 A0A5G2R784	-
ENSSSCT00000033803.2	OPHN1-202	6195	695aa	ENSSSCP00000029540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VVQ2 K7GNT5	-

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Summary

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