Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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ID History
- Gene history

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Gene: PDE6D ENSSSCG00000016279

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Description

phosphodiesterase 6D [Source:VGNC Symbol;Acc:VGNC:96474]

Location

Primary_assembly 15: 132,375,743-132,426,683 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000065799.2	PDE6D-202	1040	150aa	ENSSSCP00000037572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480V9G7 A0A4X1THT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000102471.1	PDE6D-201	5060	76aa	ENSSSCP00000078622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHA8	-
ENSSSCT00000071709.2	PDE6D-203	1450	93aa	ENSSSCP00000062369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TFD5 A0A5G2QW04	-

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Summary

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