SRY-box transcription factor 13 [Source:VGNC Symbol;Acc:VGNC:93352]
Primary_assembly 9: 64,731,969-64,780,942 forward strand.
Sscrofa11.1:CM000820.5
This gene has 5 transcripts (splice variants), 211 orthologues and 20 paralogues.
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SRY-box transcription factor 13 [Source:VGNC Symbol;Acc:VGNC:93352]
Primary_assembly 9: 64,731,969-64,780,942 forward strand.
Sscrofa11.1:CM000820.5
This gene has 5 transcripts (splice variants), 211 orthologues and 20 paralogues.
Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
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ENSSSCT00000070278.2 | SOX13-203 | 3694 | 676aa | ENSSSCP00000059630.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2Q772 A0A8D1TR46 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
ENSSSCT00000016646.5 | SOX13-205 | 4108 | 614aa | ENSSSCP00000016200.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D2CDI2 F1S3U8 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
ENSSSCT00000070039.2 | SOX13-201 | 3770 | 615aa | ENSSSCP00000064889.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A480KAT6 A0A4X1V0X8 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
ENSSSCT00000067643.1 | SOX13-202 | 3638 | 638aa | ENSSSCP00000059685.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2Q7B2 A0A8D1E426 | - |
ENSSSCT00000070526.2 | SOX13-204 | 3635 | 656aa | ENSSSCP00000061586.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QDA6 A0A8D0X0A3 | - |
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Ensembl release 111 - January 2024 ©
EMBL-EBI
EMBL-EBI
http://useast.ensembl.org
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