Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GAP43 ENSSSCG00000031244

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Description

growth associated protein 43 [Source:NCBI gene (formerly Entrezgene);Acc:100623423]

Location

Primary_assembly 13: 144,364,317-144,629,174 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000071628.2	GAP43-203	1029	244aa	ENSSSCP00000073187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7G3 A0A8D1E8U9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000069685.2	GAP43-202	1723	222aa	ENSSSCP00000072111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R4V2 A0A8D1WAQ6	-
ENSSSCT00000040414.3	GAP43-201	1670	243aa	ENSSSCP00000037396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0Z5 A0A4X1T113	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data