Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SETD7 ENSSSCG00000030396

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Description

SET domain containing 7, histone lysine methyltransferase [Source:VGNC Symbol;Acc:VGNC:92762]

Location

Primary_assembly 8: 87,478,173-87,527,188 forward strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039261.3	SETD7-201	7071	539aa	ENSSSCP00000043765.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AIP9 A0A4X1VG40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000037668.3	SETD7-202	7071	494aa	ENSSSCP00000035457.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZVH9 A0A8D0UXJ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data