Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BRCA1 ENSSSCG00000022101

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Description

BRCA1 DNA repair associated [Source:VGNC Symbol;Acc:VGNC:85869]

Location

Primary_assembly 12: 19,786,020-19,854,668 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 6 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000057335.3	BRCA1-202	7645	1845aa	ENSSSCP00000034439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZS33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000065760.3	BRCA1-203	5777	1818aa	ENSSSCP00000046543.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AR43	-
ENSSSCT00000089712.2	BRCA1-206	5704	995aa	ENSSSCP00000062687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QDI7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000072693.2	BRCA1-205	4413	676aa	ENSSSCP00000062168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEQ2	-
ENSSSCT00000077890.2	BRCA1-204	3606	721aa	ENSSSCP00000065183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0YLG0 I3L7C9	-
ENSSSCT00000070474.1	BRCA1-201	2351	99aa	ENSSSCP00000067068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQQ2 A0A8D1N9Q9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data