Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: LIPA ENSSSCG00000010450

.

Description

lipase A, lysosomal acid type [Source:VGNC Symbol;Acc:VGNC:89737]

Location

Primary_assembly 14: 101,126,257-101,193,614 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 5 transcripts (splice variants), 277 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011436.5	LIPA-205	4409	450aa	ENSSSCP00000011139.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ISH2 F1SCY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000101903.1	LIPA-203	4467	403aa	ENSSSCP00000078551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGJ0	-
ENSSSCT00000050330.3	LIPA-201	4323	355aa	ENSSSCP00000042725.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFV3 A0A4X1V3G7	-
ENSSSCT00000059522.3	LIPA-204	4262	401aa	ENSSSCP00000045472.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AN93	-
ENSSSCT00000037584.3	LIPA-202	2730	427aa	ENSSSCP00000035638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZVK3 A0A4X1V3F8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data