Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SKA1 ENSSSCG00000004518

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Description

spindle and kinetochore associated complex subunit 1 [Source:VGNC Symbol;Acc:VGNC:103176]

Location

Primary_assembly 1: 99,976,485-99,993,462 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 2 transcripts (splice variants) and 97 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000004990.4	SKA1-201	1104	255aa	ENSSSCP00000004873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UKI5 F1RPP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000062962.2	SKA1-202	966	209aa	ENSSSCP00000051341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B4C8 A0A4X1UJX0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data