Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Gene: NELFE ENSSSCG00000001423

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Description

negative elongation factor complex member E [Source:VGNC Symbol;Acc:VGNC:90682]

Location

Primary_assembly 7: 24,040,525-24,047,025 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants) and 192 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001565.6	NELFE-203	1292	406aa	ENSSSCP00000001523.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RQW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000085610.2	NELFE-204	1558	378aa	ENSSSCP00000067002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQJ2 A0A8D0M205	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000035393.4	NELFE-205	1503	380aa	ENSSSCP00000031031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JLM4 K7GSZ0	-
ENSSSCT00000032936.4	NELFE-202	1374	385aa	ENSSSCP00000030013.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7E6 A0A8D1JLL4	-
ENSSSCT00000067708.2	NELFE-201	1260	347aa	ENSSSCP00000071569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R5G6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data