Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SARNP ENSSSCG00000000364

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Description

SAP domain containing ribonucleoprotein [Source:VGNC Symbol;Acc:VGNC:99729]

Location

Primary_assembly 5: 21,199,422-21,261,876 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 8 transcripts (splice variants) and 243 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000096509.1	SARNP-206	3238	238aa	ENSSSCP00000078815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000047885.2	SARNP-207	3176	210aa	ENSSSCP00000047451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480SMR3 A0A4X1W9N7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000071634.2	SARNP-208	2996	205aa	ENSSSCP00000064583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1J075 A0A8D1QHI4	-
ENSSSCT00000104691.1	SARNP-203	2392	213aa	ENSSSCP00000077328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FDD8	-
ENSSSCT00000079480.2	SARNP-201	1946	207aa	ENSSSCP00000061207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QAZ5	-
ENSSSCT00000000387.5	SARNP-204	711	236aa	ENSSSCP00000000381.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SPJ5	-
ENSSSCT00000079604.2	SARNP-205	660	212aa	ENSSSCP00000065406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1WB32 A0A8D1J9N7	-
ENSSSCT00000076511.2	SARNP-202	636	211aa	ENSSSCP00000072164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RJQ8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data