Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NUP50 ENSSSCG00000000019

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Description

nucleoporin 50 [Source:VGNC Symbol;Acc:VGNC:90983]

Location

Primary_assembly 5: 4,197,544-4,219,230 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 2 transcripts (splice variants) and 225 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059699.2	NUP50-202	5205	440aa	ENSSSCP00000055018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BFB9 A0A8D1HK00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000000020.5	NUP50-201	2808	440aa	ENSSSCP00000000020.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1S5U6 F1SJU9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data