Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COMMD9 ENSSSCG00000013293

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Description

COMM domain containing 9 [Source:VGNC Symbol;Acc:VGNC:86891]

Location

Primary_assembly 2: 24,819,569-24,839,079 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000071857.2	COMMD9-205	1442	197aa	ENSSSCP00000060639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQT4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000071593.2	COMMD9-202	1349	168aa	ENSSSCP00000072803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RKT5	-
ENSSSCT00000072701.2	COMMD9-201	1328	161aa	ENSSSCP00000071049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R1Q5	-
ENSSSCT00000086853.2	COMMD9-204	1076	155aa	ENSSSCP00000072336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7L1	-
ENSSSCT00000014518.5	COMMD9-203	576	184aa	ENSSSCP00000014125.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SHG3	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data