MHC class I antigen 8 [Source:NCBI gene (formerly Entrezgene);Acc:100135036]
Primary_assembly 7: 23,622,397-23,628,329 forward strand.
Sscrofa11.1:CM000818.5
This gene has 6 transcripts (splice variants), 560 orthologues and 26 paralogues.
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MHC class I antigen 8 [Source:NCBI gene (formerly Entrezgene);Acc:100135036]
Primary_assembly 7: 23,622,397-23,628,329 forward strand.
Sscrofa11.1:CM000818.5
This gene has 6 transcripts (splice variants), 560 orthologues and 26 paralogues.
Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
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ENSSSCT00000064473.2 | - | 3977 | 434aa | ENSSSCP00000049757.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B0R8 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
ENSSSCT00000001522.4 | - | 3845 | 390aa | ENSSSCP00000047120.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ASQ8 A0A8D1UEM3 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
ENSSSCT00000053176.2 | - | 3749 | 358aa | ENSSSCP00000052847.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B9T6 A0A8D0V381 | - |
ENSSSCT00000051898.3 | - | 1400 | 334aa | ENSSSCP00000045072.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AM07 | - |
ENSSSCT00000035331.3 | - | 1353 | 433aa | ENSSSCP00000029078.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7GMI5 | - |
ENSSSCT00000001330.4 | - | 926 | 244aa | ENSSSCP00000001299.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1SNB9 F1S1N0 | - |
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More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.
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Ensembl release 112 - May 2024 ©
EMBL-EBI
EMBL-EBI
http://useast.ensembl.org
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