Transcript: ENSRNOT00000103330.1 Dsg2-202

Description

desmoglein 2 [Source:RGD Symbol;Acc:1311143]

Gene Synonyms

LOC307562

Location

About this transcript

This transcript has 14 exons, is annotated with 58 domains and features, is associated with 238 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103330.1	Dsg2-202	4945	1131aa	ENSRNOP00000087276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AG90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000022270.7	Dsg2-201	5199	1128aa	ENSRNOP00000022270.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LYX9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,945 bps, Translation length: 1,131 residues

Version

ENSRNOT00000103330.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.