Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Supt5h ENSRNOG00000032034

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Description

SPT5 homolog, DSIF elongation factor subunit [Source:RGD Symbol;Acc:1563807]

Location

Primary_assembly 1: 83,586,718-83,616,892 reverse strand.

mRatBN7.2:CM026974.1

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000093383.2	Supt5h-203	3789	1163aa	ENSRNOP00000081111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZR84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000093345.2	Supt5h-202	3549	1083aa	ENSRNOP00000080314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQE4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000093384.2	Supt5h-204	3537	1079aa	ENSRNOP00000076183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W2Q689	-
ENSRNOT00000048905.7	Supt5h-201	3501	1067aa	ENSRNOP00000049521.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PTB2	-
ENSRNOT00000093740.2	Supt5h-205	3390	1030aa	ENSRNOP00000076244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W2Q6F0	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data