Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
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- Structural variants
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Gene: R3hdm4 ENSRNOG00000011489

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Description

R3H domain containing 4 [Source:RGD Symbol;Acc:1307067]

Gene Synonyms

RGD1307067

Location

Primary_assembly 7: 9,790,322-9,797,512 forward strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 2 transcripts (splice variants), 181 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094419.1	R3hdm4-202	1479	297aa	ENSRNOP00000094170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000015869.9	R3hdm4-201	1746	261aa	ENSRNOP00000015869.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8XLF6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data