Gene: Ssb ENSRNOG00000007998

Description

small RNA binding exonuclease protection factor La [Source:RGD Symbol;Acc:620804]

Gene Synonyms

MGC93380

Location

Primary_assembly 3: 54,616,619-54,626,203 forward strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 4 transcripts (splice variants), 219 orthologues, 10 paralogues and is associated with 1 phenotype.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011174.6	Ssb-201	1715	414aa	ENSRNOP00000011175.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FK94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105351.1	Ssb-203	2011	407aa	ENSRNOP00000090563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACS2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000112148.1	Ssb-204	1505	377aa	ENSRNOP00000083561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZL0	-
ENSRNOT00000100130.1	Ssb-202	1421	405aa	ENSRNOP00000092285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AH92	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,