Gene: Cdhr5 ENSRNOG00000017762

Description

cadherin-related family member 5 [Source:RGD Symbol;Acc:620504]

Gene Synonyms

GP100, MGC114263, Mucdhl, Mupcdh

Location

Primary_assembly 1: 196,373,112-196,381,543 reverse strand.

mRatBN7.2:CM026974.1

About this gene

This gene has 3 transcripts (splice variants), 98 orthologues, 33 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000044238.4	Cdhr5-201	2695	862aa	ENSRNOP00000044906.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JIK1-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000116993.1	Cdhr5-203	2540	823aa	ENSRNOP00000096117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQ62	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000116628.1	Cdhr5-202	2119	670aa	ENSRNOP00000089658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACD8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,