Transcript: ENSPTRT00000083806.1 CAPN10-205

Description

calpain 10 [Source:VGNC Symbol;Acc:VGNC:10626]

Location

Chromosome 2B: 131,759,314-131,789,477 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSPTRG00000013108.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000024318.5	CAPN10-201	2639	672aa	ENSPTRP00000022437.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W9T5 K7CKA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000100259.1	CAPN10-202	2174	517aa	ENSPTRP00000071634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4Y8 A0A6D2W7L4	-
ENSPTRT00000093979.1	CAPN10-203	1962	653aa	ENSPTRP00000064461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RII2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000083806.1	CAPN10-205	420	139aa	ENSPTRP00000077722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SL37 A0A6D2WG90	-
ENSPTRT00000099930.1	CAPN10-204	417	138aa	ENSPTRP00000076420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SHQ7 A0A6D2XZ38	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 420 bps, Translation length: 139 residues

Version

ENSPTRT00000083806.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 3.

Transcript: ENSPTRT00000083806.1 CAPN10-205

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Transcript: ENSPTRT00000083806.1 CAPN10-205

Summary

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