Transcript: ENSMUST00000180639.3 A330009N23Rik-201

Description

RIKEN cDNA A330009N23 gene [Source:MGI Symbol;Acc:MGI:2443491]

Location

About this transcript

This transcript has 3 exons, is associated with 506 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000229610.3	A330009N23Rik-203	1611	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000180639.3	A330009N23Rik-201	1393	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241551.1	A330009N23Rik-204	1360	No protein	-	lncRNA	-
ENSMUST00000229239.3	A330009N23Rik-202	1314	No protein	-	lncRNA	-
ENSMUST00000245167.1	A330009N23Rik-206	1222	No protein	-	lncRNA	-
ENSMUST00000241761.1	A330009N23Rik-205	832	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,393 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000180639.3

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.