Transcript: ENSMUST00000249318.1 Zscan4e-203

Description

zinc finger and SCAN domain containing 4E [Source:MGI Symbol;Acc:MGI:3643613]

Gene Synonyms

EG665848

Location

Chromosome 7: 11,039,245-11,044,607 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 747 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095936.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000166753.5	Zscan4e-201	2834	505aa	ENSMUSP00000147491.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B0GRE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000249317.1	Zscan4e-202	2727	505aa	ENSMUSP00000159691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000249318.1	Zscan4e-203	5279	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 5,279 bps,

Version

ENSMUST00000249318.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENSMUST00000249318.1 Zscan4e-203

Summary

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Transcript: ENSMUST00000249318.1 Zscan4e-203

Summary

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