Transcript: ENSMUST00000237307.2 Prob1-203

Description

proline rich basic protein 1 [Source:MGI Symbol;Acc:MGI:2686460]

Gene Synonyms

Gm1614, LOC381148

Location

Chromosome 18: 35,783,408-35,785,059 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 501 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000073600.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000190196.5	Prob1-202	4888	1010aa	ENSMUSP00000140465.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS79611	A0A087WR45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000097619.2	Prob1-201	3021	1006aa	ENSMUSP00000095224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3UKG2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000237307.2	Prob1-203	510	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 510 bps,

Version

ENSMUST00000237307.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000237307.2 Prob1-203

Summary

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Transcript: ENSMUST00000237307.2 Prob1-203

Summary

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