Transcript: ENSMUST00000145237.8 Zscan4f-202

Description

zinc finger and SCAN domain containing 4F [Source:MGI Symbol;Acc:MGI:3708485]

Gene Synonyms

C330039H09Rik

Location

Chromosome 7: 11,131,842-11,136,245 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 30 domains and features, is associated with 389 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000070828.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000145237.8	Zscan4f-202	1829	506aa	ENSMUSP00000120149.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52015	Q3URS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000141491.2	Zscan4f-201	521	77aa	ENSMUSP00000122083.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		L7N266	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,829 bps, Translation length: 506 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3URS2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52015

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000145237.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000145237.8 Zscan4f-202

Summary

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Transcript: ENSMUST00000145237.8 Zscan4f-202

Summary

About Us

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