Transcript: ENSMUST00000203700.3 Or13a1-202

Description

olfactory receptor family 13 subfamily A member 1 [Source:MGI Symbol;Acc:MGI:3030045]

Gene Synonyms

GA_x54KRFPKN04-58127726-58128655, MOR253-9, Olfr211

Location

Chromosome 6: 116,466,052-116,475,182 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 24 domains and features, is associated with 886 variant alleles and maps to 74 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000053391.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000203700.3	Or13a1-202	4880	309aa	ENSMUSP00000145330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20453	Q8VGH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000065786.4	Or13a1-201	930	309aa	ENSMUSP00000066524.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20453	Q8VGH2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,880 bps, Translation length: 309 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20453

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000203700.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000203700.3 Or13a1-202

Summary

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Transcript: ENSMUST00000203700.3 Or13a1-202

Summary

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