Transcript: ENSMUST00000228227.2 Ranbp3l-202

Description

RAN binding protein 3-like [Source:MGI Symbol;Acc:MGI:2444654]

Gene Synonyms

C130037N17Rik

Location

About this transcript

This transcript has 5 exons, is associated with 2329 variant alleles and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000227191.3	Ranbp3l-201	4230	491aa	ENSMUSP00000154327.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3BQU7 Q6PDH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000229662.2	Ranbp3l-203	648	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-
ENSMUST00000228227.2	Ranbp3l-202	3294	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 3,294 bps,

Version

ENSMUST00000228227.2

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.