Transcript: ENSMUST00000225089.2 Prl3b1-202

Description

prolactin family 3, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:97607]

Gene Synonyms

Csh2, PL, Pl-2, Pl2, mPL-II, mplII, prolactin-like

Location

Chromosome 13: 27,425,830-27,431,928 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 838 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000038891.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000035273.4	Prl3b1-201	879	222aa	ENSMUSP00000047680.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26393	P09586 Q5SZY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225089.2	Prl3b1-202	698	150aa	ENSMUSP00000153139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCU9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 698 bps, Translation length: 150 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSMUST00000225089.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000225089.2 Prl3b1-202

Summary

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Transcript: ENSMUST00000225089.2 Prl3b1-202

Summary

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