Transcript: ENSMUST00000233619.2 Rhag-202

Description

Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]

Gene Synonyms

CD241, Rh50, Rh50A

Location

Chromosome 17: 41,122,075-41,142,136 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1464 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000023926.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024721.8	Rhag-201	2339	438aa	ENSMUSP00000024721.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28787	Q9QUT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000233740.2	Rhag-203	1590	396aa	ENSMUSP00000156889.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WBH6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000233619.2	Rhag-202	386	61aa	ENSMUSP00000156765.2	Nonsense mediated decay		A0A3B2W462	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 386 bps, Translation length: 61 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000233619.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000233619.2 Rhag-202

Summary

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Transcript: ENSMUST00000233619.2 Rhag-202

Summary

About Us

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