Transcript: ENSMUST00000171002.10 P2rx6-202

Description

purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]

Gene Synonyms

P2rxl1, P2xm

Location

Chromosome 16: 17,379,749-17,388,964 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 23 domains and features, is associated with 960 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022758.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023441.11	P2rx6-201	2345	389aa	ENSMUSP00000023441.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28007	O54803	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000171002.10	P2rx6-202	1353	362aa	ENSMUSP00000132727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49778	E9PY29	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231806.2	P2rx6-203	3382	286aa	ENSMUSP00000156201.2	Nonsense mediated decay		A0A338P727	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,353 bps, Translation length: 362 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49778

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000171002.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000171002.10 P2rx6-202

Summary

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Transcript: ENSMUST00000171002.10 P2rx6-202

Summary

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