Transcript: ENSMUST00000006565.13 Cdc20-201

Description

cell division cycle 20 [Source:MGI Symbol;Acc:MGI:1859866]

Gene Synonyms

2310042N09Rik, p55CDC

Location

Chromosome 4: 118,290,098-118,294,549 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 693 variant alleles and maps to 283 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000006398.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000006565.13	Cdc20-201	1793	499aa	ENSMUSP00000006565.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18551	Q9JJ66	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000183942.2	Cdc20-203	771	197aa	ENSMUSP00000139345.2	Nonsense mediated decay		V9GXW0	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000151302.2	Cdc20-202	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,793 bps, Translation length: 499 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JJ66

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18551

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000006565.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000006565.13 Cdc20-201

Summary

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Transcript: ENSMUST00000006565.13 Cdc20-201

Summary

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