Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: Oxld1 ENSMUSG00000039670

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Description

oxidoreductase like domain containing 1 [Source:MGI Symbol;Acc:MGI:1913681]

Gene Synonyms

1810049H13Rik

Location

Chromosome 11: 120,347,432-120,348,894 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 2 transcripts (splice variants) and 181 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000044007.3	Oxld1-201	813	201aa	ENSMUSP00000036860.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25735	B2RVP3 Q9CR10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000137632.2	Oxld1-202	372	124aa	ENSMUSP00000135197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BK04	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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