Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Shisa8 ENSMUSG00000096883

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Description

shisa family member 8 [Source:MGI Symbol;Acc:MGI:2146080]

Gene Synonyms

AI848285, CKAMP39, Orf26

Location

Chromosome 15: 82,090,369-82,097,016 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 2 transcripts (splice variants), 373 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000179269.3	Shisa8-201	2588	399aa	ENSMUSP00000137002.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56994	J3QNX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229543.2	Shisa8-202	823	242aa	ENSMUSP00000155616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VI13	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data