Gene: Rnasek ENSMUSG00000093989

Description

ribonuclease, RNase K [Source:MGI Symbol;Acc:MGI:106369]

Gene Synonyms

2310033H11Rik, D11Bwg0434e

Location

Chromosome 11: 70,128,950-70,130,668 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 3 transcripts (splice variants), 224 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000040428.4	Rnasek-201	611	98aa	ENSMUSP00000048271.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36204	Q8K3C0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000141880.2	Rnasek-203	465	71aa	ENSMUSP00000135383.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BJV0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000125752.3	Rnasek-202	779	35aa	ENSMUSP00000135891.2	Nonsense mediated decay		H3BLR9	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,